feat: Code Mode — the registry's mode config, the SDK codegen, and the run_code bridge

The dsh-tools half of the Code Mode RFC (its fourth, final change): the
registry gains its first config — mode: native | code | both — and OWNS how
its tools reach the model. 'code' contributes exactly one wire tool,
run_code, plus a lazy tools:sdk prompt section declaring every other tool
as a generated TypeScript API (jsonSchemaToTs: total over the defineTool
subset, unknown degradation, lexicographic byte-identical rendering);
'both' ships both representations; 'native' is byte-for-byte the old
behavior. Non-native modes fail every assembly loudly without a
typescript-language ctx.codeRuntime.

run_code's dispatch bridge: JSON-normalizes each binding argument before
dispatch (what dispatches is what the tool/code-dispatch event logs — the
append can never fail on payload shape; BigInt/circulars reject that one
call), serializes all program tool calls through a per-run queue (even
Promise.all — no concurrency-safety metadata yet), routes every sub-call
through tools/pre-execute → tools/post-execute (a deny rejects the
program-side promise), drops sub-call additionalContext (no safe outlet
mid-run; pinned), owns a run-scoped abort that follows the outer signal in
and fires on settlement (in-flight sub-dispatch aborted, queued abandoned,
queue drained before returning), and converts a failed run into
CodeRunFailedError → a structured isError carrying kind + captured logs.
tool/code-dispatch joins SessionEventMap by declaration merging (log-only;
deriveMessages ignores it).

The composed surface: the tools config forwards through agent-core and
both app packages; examples/code-agent + demo:code run the worker runtime
under mode code (keyless boot smoke + a with-key e2e proving the collapsed
[run_code] header, the dispatch events, and the file the program wrote);
two new snapshot scenarios (code-mode-turn, both-mode-turn) record the SDK
section, collapsed header, dispatch events, and result card — each its own
header-pinning class (the harness gains per-scenario config overlays and
per-class pins). Catalogs, graphs, cookbook, hooks-bridge notes, and the
RFC (moved to implemented/, restructured to decision-era headings) updated
in the same change.

docs/core-data-structures/code-runtime.md

@@ -1,6 +1,6 @@
 # Code Runtime
 
-The code-execution seam — a [capability seam](../rfc/implemented/architecture/2026-06-13-capability-seams.md) whose interface ([dsh-code-runtime](../../packages/code-runtime/code-runtime), `ctx.codeRuntime`) runs one model-written program against host-provided async bindings and reports what it printed and returned. Code execution is **one optional capability**, not part of the agent-loop spine — so its vocabulary lives here, not in [core.md](core.md). Backends differ by execution substrate and source language, both readonly descriptors on the service; the worker-thread backend and the tool-registry consumer (Code Mode) are specified in the [Code Mode RFC](../rfc/proposed/feature/2026-06-15-code-mode.md).
+The code-execution seam — a [capability seam](../rfc/implemented/architecture/2026-06-13-capability-seams.md) whose interface ([dsh-code-runtime](../../packages/code-runtime/code-runtime), `ctx.codeRuntime`) runs one model-written program against host-provided async bindings and reports what it printed and returned. Code execution is **one optional capability**, not part of the agent-loop spine — so its vocabulary lives here, not in [core.md](core.md). Backends differ by execution substrate and source language, both readonly descriptors on the service; the worker-thread backend and the tool-registry consumer (Code Mode) are specified in the [Code Mode RFC](../rfc/implemented/feature/2026-06-15-code-mode.md).
 
 Source: [`packages/code-runtime/code-runtime/src/types.ts`](../../packages/code-runtime/code-runtime/src/types.ts)